Cavα2δ4

Gene: cacna2d4

Edit

Gene

Species	NCBI gene ID	Chromosome	Position
Human	93589	12	126689
Mouse	319734	6	115933
Rat	312668	4	115957

Edit

Transcript

Species	NCBI accession	Length (nt)
Human	NM_172364.5	5285
Mouse	NM_001033382.3	5805
Rat	NM_001191751.1	3465

Edit

Protein Isoforms

Species	Uniprot ID	Length (aa)
Human	Q7Z3S7	1137
Mouse	Q5RJF7	1116
Rat	D3ZM84	1091

Isoforms

Transcript

Length (nt)

Protein

Length (aa)

Variant

Isoform

Known

NM_172364.5

5285

NP_758952.4

1137

Predicted

XM_047429897.1

3606

XP_047285853.1

1130

transcript variant X2

isoform X2

XM_011521041.3

3615

XP_011519343.1

1133

transcript variant X1

isoform X1

XM_047429899.1

2842

XP_047285855.1

826

transcript variant X4

isoform X4

XM_047429898.1

2914

XP_047285854.1

850

transcript variant X3

isoform X3

XM_054332326.1

3606

XP_054188301.1

1130

transcript variant X2

isoform X2

XM_054332325.1

3615

XP_054188300.1

1133

transcript variant X1

isoform X1

XM_054332328.1

2842

XP_054188303.1

826

transcript variant X4

isoform X4

XM_054332327.1

2914

XP_054188302.1

850

transcript variant X3

isoform X3

XM_054373864.1

3606

XP_054229839.1

1130

transcript variant X2

isoform X2

XM_054373863.1

3615

XP_054229838.1

1133

transcript variant X1

isoform X1

XM_054373866.1

2842

XP_054229841.1

826

transcript variant X4

isoform X4

XM_054373865.1

2914

XP_054229840.1

850

transcript variant X3

isoform X3

Known

NM_001033382.3

5805

NP_001028554.3

1116

transcript variant 1

isoform 1 precursor

NM_001347427.2

5730

NP_001334356.2

1091

transcript variant 2

isoform 2

NM_001362214.1

3258

NP_001349143.1

275

transcript variant 3

isoform 3

NM_001404361.1

3263

NP_001391290.1

704

isoform 7 precursor

NM_001404358.1

5784

NP_001391287.1

1109

isoform 4 precursor

NM_001404360.1

3141

NP_001391289.1

715

isoform 6

NM_001404359.1

3216

NP_001391288.1

740

isoform 5 precursor

Predicted

XR_004942965.1

5083

transcript variant X2

XM_036166219.1

4979

XP_036022112.1

1137

transcript variant X1

isoform X1

XM_030255452.2

3512

XP_030111312.1

296

transcript variant X3

isoform X2

Edit

Post-Translational Modifications

PTM

Position

Type

Glycosylation

180

N-linked (GlcNAc...) asparagine

Glycosylation

643

N-linked (GlcNAc...) asparagine

Glycosylation

725

N-linked (GlcNAc...) asparagine

Disulfide bond

650

Interchain (between alpha-2-4 and delta-4 chains)

Edit

Structure

Cavα2δ4 predicted AlphaFold size

Species	Area (Å²)	Reference
Human	6362.74	source
Mouse	9115.08	source
Rat	9518.89	source

Methodology for AlphaFold size prediction and disclaimer are available here

References

Edit

Credits

To cite this page: [Contributors] Channelpedia https://channelpedia.epfl.ch/wikipages/251/ , accessed on 2024 Apr 27

Add section